SPARTA-teaching
RNA-seq background information, data analysis procedure, and details of the analysis tools
RNA-seq background information
Basic analysis procedure
Trimmomatic
FastQC
Bowtie
HTSeq
Differential gene expression with edgeR
Frequently Asked Questions
Mac OS X tutorial
Introduction
Basic Terminal Commands
Install Dependencies
Initializing SPARTA
Analyzing Example Data
Analyzing Your Data
Identifying Potential Batch Effects
Altering Workflow Execution Options
Windows tutorial
Introduction
Basic Terminal Commands
Install Dependencies
Initializing SPARTA
Analyzing Example Data
Analyzing Your Data
Identifying Potential Batch Effects
Altering Workflow Execution Options
Linux tutorial
Introduction
Basic Terminal Commands
Install Dependencies
Initializing SPARTA
Analyzing Example Data
Analyzing Your Data
Identifying Potential Batch Effects
Altering Workflow Execution Options
License
Release notes
Citation
Acknowledgements
Functionality wishlist
SPARTA-teaching
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Release notes
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Release notes
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Version 1.0
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